Replaces accession AW927428

Could not identify a longer seuqence on the MAGI database (neither a MEC or a predicted gene).

Rant the accession's sequence through interproscan and got the following results: no informative hits

Repeat masker showed

>DV549774 1000070-E05.GAD10-F UGI-Reseq Zea mays cDNA, mRNA sequence.  (43 bp masked -- 6.37% masked)
CTGACAGAGAACTCCCAGCCAAAATGAAACTGGACTTCCAGCAATAGCAGCAATGTCACTAGAACCTTTCATACTGGAGA
ATAACTAGAAGTTTATGGGGAATACAACCCTTAAGGTTTGGCTATGATTCTAAATCAACCATGCTTACTAAACAACTCAA
TCATGCACTCGTAATGCTCCATTCGAGGCGTAATACCAGAATCTTCACTCATCGAGAACAAGTATCTTTGACCTAGATTA
ACATATCCTTCACAAATACAAGCTAGCAAGGCATCTGGATAACTTACAAGATAAGTTTATGCGTGCCACCTATCATTTGA
TACTGCCTGATCAAGTCTTTGGATCAAGTATGTTTAGAAAAAGGAATATGCACAGGAAATCAAGCAAGAGGATGCGGACA
GTAACGATCGCGTAAAGGAGGGCCCGCTTACTAATACGGAGAGGGTTCCGCATGAAAAAGACAATCCTAAACTTCTTCGT
TTCGTTGGTTTTTCTAAGGTCTTTTAAATTATCTTTTTTTTGAACATGAACGGAAGTAGCGTAGGACACCCAATCCTCGG
TCAAACCTCTACTTCAATGAACCACGTCGCGTTCTTTATCTTTCTCACTCGTCGTTTCGTTGGAAAACCTACCNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN

The sequence did not hit with any MAGI (4.0)

MAGI sequenced BAC's Blast results: THe sequence hit with three sequences on three different BAC's,

however, after pairwise blasing of all three BAC's together, they all overlap where this sequence hits.

This indicates that there are no paralogs currently.

9-8-06:

BlastN showed these results:

gi|40794996|gb|AY506529.1|  Zea mays strain NB mitochondrion, com  1187    0.0   
gi|93116077|gb|DQ490952.1|  Zea mays subsp. mays genotype male...  1187    0.0   
gi|93116122|gb|DQ490953.1|  Zea mays subsp. mays genotype CMS-...  1187    0.0   
gi|93116033|gb|DQ490951.1|  Zea mays subsp. mays genotype CMS-...  1179    0.0   
gi|21216777|gb|AY112187.1|  Zea mays CL4565_1 mRNA sequence         630    1e-177
gi|74100068|gb|DQ167399.1|  Oryza sativa (indica cultivar-grou...   426    4e-116

Inteproscan:

no hits reported