SAM Chip 1.0 (GPL2557): SAM vs Whole Seedling

Annotation Statistics Significantly
Diffregulated
Entries (≤ 0.0001)		 Significantly
Up-Regulated
Entries		 Significantly
Down-Regulated
Entries
Total1819892927
Annotated1819892927

Accession Name Category GO Subcategory Notes  

 Show all entries Category Analysis P-value cutoff:

Accession Number Names Categories Molecular
Function		 Sig. P-Value Fold Ch.  
DV942864
  • Tekay Gag-pol polyprotein
  • Transposable Elements
 6.37e-07 L 8057.7 Details
DV491560
  • Gag-pol polyprotein
  • Transposable Elements
 2.11e-06 L 5647.11 Details
BG873727
BG840297
  • Leucine-rich Repeat family
  • Ser/Thr Receptor Kinase family
  • Signal Transduction
  • binding
 4.7e-06 L 3857.84 Details
DV943366
  • Prem-1 Gag-pol polyprotein
  • Transposable Elements
 4.04e-06 H 178.057 Details
DV491452
  • Zea mays CRM centromeric retrotranposon (5' to gag-pol coding region)
  • Transposable Elements
 2.49e-06 H 250.497 Details
DV490676
  • PREM-1-like
  • Transposable Elements
 1.2e-06 L 2494.12 Details
DV493948
  • MySEG 123
  • contains SDRv3.1_13447
  • MySEG
 2.12e-06 H 76.7642 Details
DV942392
  • CCR4-NOT transcription complex, subunit NOT2
  • Transcription
 1.97e-06 M 187.158 Details
DV490088
  • MySEG 124
  • putative prem1 (probable LTR) containing
  • MySEG
 6.01e-06 L 1459.48 Details
DV491600
  • statistically defined repeat
  • Transposable Elements
 3.75e-06 L 1413.65 Details
DV491774
  • MySEG 124
  • MySEG
 9.3e-06 L 1207.59 Details
DV493695
  • unknown protein
  • Unknown
 1.44e-05 L 943.169 Details
DV491725
  • Aspartate kinase-like
  • EC:2.7.2.4
  • Metabolism
 1.36e-07 H 36.2567 Details
DV622110
  • MySEG 125
  • MySEG
 3.43e-06 L 888.841 Details
DV489538
  • Zea mays Cinful protease-pol fusion
  • Transposable Elements
 1.23e-05 L 816.821 Details
DV491914
  • statistically defined repeat
  • Other
 8.41e-06 L 816.409 Details
DV550068
  • Grande Gag-pol polyprotein
  • Transposable Elements
 2.9e-05 L 697.496 Details
AF047852
  • Zea mays terminal ear1
  • RNA Binding Protein
  • binding
 1.48e-05 H 44.9008 Details
DV490147
  • MySEG 126
  • MySEG
 2.54e-05 L 632.201 Details
DV492877
  • Opie-2 gag-pol polyprotein
  • Transposable Elements
 9.54e-05 H 107.321 Details
DV491052
  • histone deacetylase complex subunit SAP18 mRNA zea mays
  • Transcription
  • Chromatin
 3.91e-05 M 956.245 Details
DV549774
  • unknown protein
  • Unknown
 2.5e-05 H 41.6618 Details
CD573035
CD573036
  • Protein of unknown function DUF724-like
  • Unknown
 6.97e-06 H 20.1041 Details
DV495075
  • Statistically defined repeat DNA
  • Other
 3.43e-05 L 357.584 Details
DV492627
  • Zinc finger, C2H2-type
  • Unknown
 4.56e-06 H 22.9026 Details
DV493601
  • Statistically defined repeat DNA
  • Other
 9.43e-06 H 36.6027 Details
DV492098
  • unknown
  • Unknown
 1.45e-05 M 18.6764 Details
DV495713
  • statistically defined repeat
  • Other
 9.85e-06 H 22.0288 Details
DV492067
  • retrotransposon Xilon1 LTR
  • Transposable Elements
 2.34e-06 M 50.2665 Details
DV621178
  • Zea mays retrotransposon Opie-2 LTR
  • Transposable Elements
 5.35e-05 H 22.4126 Details
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Partial support for this work is provided by the National Science Foundation.

Truman State University | Math & CS Department | Biology Department