SAM Chip 2.0 (GPL2572): SAM vs Whole Seedling

Annotation Statistics Significantly
Diffregulated
Entries (≤ 0.0001)		 Significantly
Up-Regulated
Entries		 Significantly
Down-Regulated
Entries
Total1829845984
Annotated1829845984

Accession Name Category GO Subcategory Notes  

 Show all entries Category Analysis P-value cutoff:

Accession Number Names Categories Molecular
Function		 Sig. P-Value Fold Ch.  
DY402262
  • putative MSH4
  • (retrotransposon repeat at 3' end)
  • Cell Division
  • DNA Repair
  • binding
 8.85207e-06 M 143.082 Details
DV491535
  • ji LTR containing
  • Other
 7.95164e-06 L 1099.48 Details
BI359476
  • xilon LTR containing
  • Transposable Elements
 9.33209e-05 H 81.6769 Details
DY400775
  • ji retrotransposon
  • Transposable Elements
 5.30573e-06 L 760.768 Details
BI396228
  • gyma retrotransposon LTR-containing
  • Other
 4.81473e-07 M 105.219 Details
BI361022
  • Statistically defined repeat DNA
  • Other
 2.77057e-07 M 69.252 Details
BM348302
  • Statistically defined repeat DNA (100% masked)
  • Other
 9.44609e-05 M 50.9381 Details
BI389372
  • eninu retrotransposon
  • Zea mays rust resistance protein rp3-1
  • Defense
  • Transposable Elements
  • DNA Repair
  • binding
 9.57848e-06 M 48.3502 Details
BI361023
  • eninu retrotransposon
  • Transposable Elements
 2.55894e-05 H 30.4499 Details
BI142286
  • Statistically defined repeat DNA
  • Other
 2.42601e-06 M 54.6054 Details
BI359217
  • repeat DNA
  • Other
 4.28433e-06 M 62.1752 Details
DY397241
  • statistically defined repeat
  • Other
 3.8518e-05 M 52.0171 Details
DY399286
  • ji retrotransposon
  • Transposable Elements
 3.88722e-05 H 35.6419 Details
BI359244
  • Statistically defined repeat DNA
  • Other
 9.91571e-06 H 95.7891 Details
BG946691
  • Statistically Defined Repeat DNA containing
  • Other
 5.98106e-06 M 66.0322 Details
DY470790
  • prem1---LTR
  • Other
 6.55827e-08 M 74.2348 Details
BI389532
  • Statistically defined repeat DNA
  • Other
 9.10343e-06 M 50.9971 Details
DY576687
  • Statistically Defined Repeats
  • Other
 5.67841e-05 L 140.877 Details
DY397752
  • SRD (67.91% masked)
  • Other
 8.21404e-06 H 21.7465 Details
BG517610
  • repeat DNA---LTR
  • Other
 1.59146e-05 H 45.7064 Details
DY396727
  • putative negative regulator of systemic acquired resistance
  • Defense
  • molecular_function unknown
 1.23531e-05 M 13.4556 Details
BI389083
  • Statistically defined repeat DNA
  • Other
 7.36129e-05 H 16.2125 Details
BI180126
  • unknown protein
  • MySEG
 5.65313e-06 H 38.199 Details
DY542802
  • milt retrotransposon
  • Transposable Elements
 4.71015e-05 H 18.5748 Details
DY576450
  • Cinful1 polyprotein [Zea mays]/ zeon retrotransposon
  • Transposable Elements
 3.47686e-08 M 35.4147 Details
DY577032
  • putative leucine-rich repeat protein kinase
  • Signal Transduction
  • binding
  • catalytic activity
 2.0543e-05 H 13.3427 Details
DY397151
  • Statistically Defined Repeat (84.04% masked)
  • Other
 2.26157e-05 M 21.421 Details
DV496033
  • unknown protein
  • Unknown
 9.02376e-06 L 85.8416 Details
DY396641
  • putative guanylate binding protein
  • Signal Transduction
  • binding
  • catalytic activity
 4.20436e-05 H 22.9459 Details
DV493814
  • unknown protein
  • Unknown
 8.95342e-05 L 81.2083 Details
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Partial support for this work is provided by the National Science Foundation.

Truman State University | Math & CS Department | Biology Department